dipy_convert_tractogram¶
Usage¶
- dipy_convert_tractogram [-h] [–reference str] [–pos_dtype str]
[–offsets_dtype str] [–out_dir str] [–out_tractogram str] input_files [input_files …]
Converts tractogram between different formats.
Positional Arguments¶
input_files Any number of tractogram files
- options:
- -h, --help
show this help message and exit
- --reference str
Reference anatomy for tck/vtk/fib/dpy file. support (.nii or .nii.gz).
- --pos_dtype str
Data type of the tractogram points, used for vtk files.
- --offsets_dtype str
Data type of the tractogram offsets, used for vtk files.
Output Arguments(Optional)¶
- --out_dir str
Output directory. (default current directory)
- --out_tractogram str
Name of the resulting tractogram
References¶
Garyfallidis, E., M. Brett, B. Amirbekian, A. Rokem, S. Van Der Walt, M. Descoteaux, and I. Nimmo-Smith. Dipy, a library for the analysis of diffusion MRI data. Frontiers in Neuroinformatics, 1-18, 2014.